YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115423079, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWIYAVAVG VLVGSGVWLL LRPRTFQVIM GLSLISYAVN LFIFGMGRLT VGRPPVVDPL  60
   61 APPDPGAYAD PLPQALVLTA IVIGFATTAL FLVVLLASRG FRGTDHVDGR EPES

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.82
Transmembrane Helix	4	21	0.81
Cytoplasmic	22	27	0.81
Transmembrane Helix	28	51	0.85
Non-Cytoplasmic	52	74	0.92
Transmembrane Helix	75	96	0.94
Cytoplasmic	97	114	0.94