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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187477434, gi...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNSFSKVAV WMVIALVLFT VFKQFDGRAQ SQDGVSYTQF MDDAKAGRIR KVDVQGDVLY  60
   61 VTPDTGRAYT LTSPGDLWMV SDLLKYGVQV SGKAREEPSL LMSIFVSWFP MLLLIGVWVF 120
  121 FMRQMQGGGR GGAFSFGKSR ARMLDENTNQ VTFADVAGCD EAKEDVQELV DFLRDPSKFQ 180
  181 KLGGRIPRGV LMVGSPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE 240
  241 NAKKHAPCII FIDEIDAVGR QRGAGLGGGN DEREQTLNQM LVEMDGFESG QGVIVIAATN 300
  301 RPDVLDPALL RPGRFDRQVV VPLPDIRGRE QILKVHMRKV PLSPNVDATI LARGTPGFSG 360
  361 ADLANLVNEA ALFAARRNGR TVDMSDFEKA KDKIIMGAER RSIVMPEEER RNTAYHESGH 420
  421 AIVARLLPKT DPVHKVTIIP RGRALGVTMQ LPESDRYSMD KERLLNTIAV LFGGRIAEEV 480
  481 FMHQMTTGAS NDFERATAIA RDIVTRYGMT DELGPVVYAE NEGEVFLGRS VTKTTHMSEA 540
  541 TMQKVDNEIR RIIDEQYGVA RKILEDNRDK VEVMTHALLE WETIDADQIN DIIEGRPPRP 600
  601 PKTPHGGPSD TPDAPASGVA GNTAAAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle