YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187479151, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPLISAQT AKARIAQGAV LADIRSMDEY AREHIAQARH VPVESLQSKK MASDGAKAVI  60
   61 FYCKSGNRTK MNAAALRAGV EGEAYILDGG LDAWKKAGLS VEKNAAQPLE LQRQVQITVG 120
  121 LLVLLGTILG AAVSPWFLLL SGFVGTGLFV AGVTGFCGMA RLLMRMPWNQ QALLK

Type	Start	End	Confidence
Cytoplasmic	1	116	0.98
Transmembrane Helix	117	138	0.89
Non-Cytoplasmic	139	142	0.67
Transmembrane Helix	143	164	0.90
Cytoplasmic	165	175	0.95