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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19923580, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSECVAGLS QTPQATLAAN GAEDSRGGEM LPAGEIGASP AAPCCSESGD ERKNLEEKSD  60
   61 INVTVLIGSK QVSEGTDNGD LPSYVSAFIE KEVGNDLKSL KKLDKLIEQR TVSKMQLEEQ 120
  121 VLTISSEIPK RIRSALKNAE ESKQFLNQFL EQETHLFSAI NSHLLTAQPW MDDLGTMISQ 180
  181 IEEIERHLAY LKWISQIEEL SDNIQQYLMT NNVPEAASTL VSMAELDIKL QESSCTHLLG 240
  241 FMRATVKFWH KILKDKLTSD FEEILAQLHW PFIAPPQSQT VGLSRPASAP EIYSYLETLF 300
  301 CQLLKLQTSD ELLTEPKQLP EKYSLPASPS VILPIQVMLT PLQKRFRYHF RGNRQTNVLS 360
  361 KPEWYLAQVL MWIGNHTEFL DEKIQPILDK VGSLVNARLE FSRGLMMLVL EKLATDIPCL 420
  421 LYDDNLFCHL VDEVLLFERE LHSVHGYPGT FASCMHILSE ETCFQRWLTV ERKFALQKMD 480
  481 SMLSSEAAWV SQYKDITDVD EMKVPDCAET FMTLLLVITD RYKNLPTASR KLQFLELQKD 540
  541 LVDDFRIRLT QVMKEETRAS LGFRYCAILN AVNYISTVLA DWADNVFFLQ LQQAALEVFA 600
  601 ENNTLSKLQL GQLASMESSV FDDMINLLER LKHDMLTRQV DHVFREVKDA AKLYKKERWL 660
  661 SLPSQSEQAV MSLSSSACPL LLTLRDHLLQ LEQQLCFSLF KIFWQMLVEK LDVYIYQEII 720
  721 LANHFNEGGA AQLQFDMTRN LFPLFSHYCK RPENYFKHIK EACIVLNLNV GSALLLKDVL 780
  781 QSASGQLSTT AALNEVGIYK LAQQDVEILL NLRTNWPNTG K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle