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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115421723, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCASCVGRV ETALAKVPGV ASVSVNLATE RADIRLAGPV DRQALVQAVE KVGYDVPAGA  60
   61 VELAVEGMTC ASCVGRVEKA LKAVPGVSEA SVNLATERAT VRGVVDTQDL IAAIKKAGYE 120
  121 AHPIDTSMQA DAEAAGKKNA ERAELKRDLI LATVLALPVF VLEMGSHMVP GVHEWVAATI 180
  181 GIQQSWYLQF VLTLLVLVFP GRRFYTKGFP ALVRLGPDMN SLVAVGTAAA FGYSVVATFA 240
  241 PGLLPAGTVN VYYEAAAVIV ALILLGRFLE ARAKGRTSEA IKRLVGLQAK EAHVRRDGRV 300
  301 IDIPISDVAL GDIVEVRPGE RVPVDGEVIE GRSFVDESMI TGEPIPVEKE SGHTVVGGTV 360
  361 NQNGALTLRA TAVGGQTMLA QIIRLVEQAQ GSKLPIQGVV DKVTLWFVPT VMLAALLTFV 420
  421 VWLAFGPSPA LSFALVNAVA VLIIACPCAM GLATPTSIMV GTGRGAEMGV LFRKGEALQL 480
  481 LKDAKVVAVD KTGTLTEGRP VLTDLEIAEG LDRKQVLAKV AAVESRSEHP IARAIVESAE 540
  541 QSGIAPPEMT NFESITGMGV RATVDGSRVE VGADRFMREL GLDVAGFAHT AERLGNEGKS 600
  601 PLYAAIDGRL AAIIAVADPI KASTPAAIAA LHKLGLKVAM ITGDNARTAQ AIARQLGIDE 660
  661 VVAEVLPEGK VEAVRRLKAS HGHVAYVGDG INDAPALAQA DVGLAIGTGT DVAVESADVV 720
  721 LMSGNLQGVP NAIALSKATI GNIRQNLFWA FGYNTALIPV AAGVLYPAYG ILLSPIIAAG 780
  781 AMALSSVFVL GNALRLRRFQ PPLAADTAAN EAP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle