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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115391856
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAYSAITWEV QRYDGWYNNL ADHDRGAADA SLVRLYPAQY MDGVYLARQE PHLPNPRRIS  60
   61 TTAMSGQSGL LSHKNRSVLS VAFGYHVWSE ISESRRAGCP PEFMHIKVQK DDPVFVSNSS 120
  121 QPVLLQFQRA DWDTSTGKSP NNPRTQVNHV TAWIDGSSIY GSSSSWSDAL REFSGGRLSS 180
  181 SSSRDMPRRS SNGYLMWSSP DPSSGPDSGS QELYEFGNAW ANENIFSVTE GIIWFRYHNY 240
  241 LASKLHKEHP SWSDEELFQH ARKRVIATFQ NIAFYEWLPA FLGTHVTSYP GYQKYVDPGI 300
  301 SVEFEAAAVR FGLTLAPPGV YKRNRTCHYR SVVNDDASKS PGLRLCNTFW NRNNPHLQSS 360
  361 LDVDELIMGM ASQIAEREDN IIVEDLRDYM YGPLRFSRSD AVALTIQRGR DFGLPSYNQI 420
  421 REALSMAPVN SFEDINPKLK DTKLLKELAD LYENDISRLE LFVGGLLETQ EGPGPVFSTI 480
  481 ILDQFERIRN ADRFWFENKQ NGLFTEEEIK AIRNTTFHDV LLDVTSAEKG DIQRSVFFWK 540
  541 NGDPCPQPQP IRASDLQPCT KAFSMSYFDD SSKVGFGVTV VVLFLFPVVS YIVASAVAQV 600
  601 RTARFKRFQQ KRSGSTKHKE PAHGTTASEW LGHNTAPRQV TLAFSEKKVF QTFDENGSPL 660
  661 SSHSLGNQDH LXVIVSNDHQ HRALLLKIPK EYDLVLFFED GVQRSEFLSL LRSELEGRIQ 720
  721 SLTVMEKSEK EMLCDAVTRE QRGKIVETFF KHAFSKVLDI DKSDAGDLSS RTREALQCEL 780
  781 TRAEFASVLG LKSDSLFVES MFTLADKDGN GYLSFQEFLD VIVIFMTGTS EEKSKLLFST 840
  841 HDIKGDGFLS KEEFTSLLRS FIDISGALSK SQADDGIAAM LQTAGLYNKD RFSWEDFHFL 900
  901 LRDHSAQLNI KGMEVLGKKK LGRQHKVSFI RKNSSSSSVE ELTHTPEEEH GQELRQRQTK 960
  961 KAGQSQAKLY VRPQRERFNR NPVQQCVQQF KRFIENYRRH IICTVVIYAI SAGLALERCI1020
 1021 YYGLQAHSSG IPETSMVDVL VSRGSAAAIS FLFPYMLLTV CRNLITMCRE TFLNRYIPFD1080
 1081 AAIDLHRQMA ATALILSVVH SLGHLVNVYI FCISDLSILA CLFPKVFSNN GSELPMKWTF1140
 1141 WFFKTVPGIT GVILLLIFAF MYVFASHYFR RISFRGFWIT HHLYVLIYVL TVVHGSYGLL1200
 1201 QQPRFHIYLI PPGLLFLLDK LISLSRKKVE IPVLKAELLL SDVTMLEFKR PQGFVYRSGQ1260
 1261 WVRIACLTLG TDEYHPFTLT SAPHEETLSL HIRAAGPWTS KLREAYSPEK HQELGGLPKL1320
 1321 YLDGPFGEGH QEWTDFEVSV LVGAGIGVTP FASILKDLVF KSSVKFKFHC KKVYFLWVTR1380
 1381 TQRQFEWLSD IIREVEDMDM QDLVSVHIYI TQLPEKFDLR TTMLYVCERH FQKVWNRSLF1440
 1441 TGLRSVTHFG RPPFLAFLSS LQEVHPEVEK VGVFSCGPPG LTKNVEKACQ QMNKRDQTHF1500
 1501 VHHYENF

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