YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115368847, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSPGGNFPA ASCVRLGMNR RSKGWWAGLL VVPLAALALG AGEKALVESN PPAAQVPPGP  60
   61 DASKGAKKTE AEWRKQLTPQ QFHVLREKGT ERAFTGKYWD HHEAGTYHCA ACGHPLFSSE 120
  121 AKFDSGTGWP SYWQPLSPSA VTLHQDTSLF MTRTEVVCAR CGGHLGHVFD DGPPPTGMRY 180
  181 CINSVSLSFQ GR

Type	Start	End	Confidence
Signal Peptide	1	40	0.70
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	192	0.99