YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115372571, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGWRDRAFR RMACRCLGLP AREVVMHPRG SLFPLSHSLR GTLAAASALP GLVLMPLGCA  60
   61 SPQAPAARDE ALASASQARP KWGIVIHGGA GVMSRENLSA EKEARIRASL TEALQAGHAI 120
  121 LARGGTSLDA VGAAVRILED SPLFNAGKGA VFTHDGKNEL DASIMDGRTL AAGSVAGLRH 180
  181 VKNPIELARR VMERSPHVMM VGEGAEAFAR EQGLELVPPE YFRTEERWEQ LQHALEKEKA 240
  241 SQGLPPATHV SPRPEDGKFG TVGAVALDQA GNLAAGTSTG GMTNKRYGRV GDSPIIGAGT 300
  301 YANAHCAVSG TGHGEFFIRY TVARDICARV EYLKAPLREA ADTVVRDVLV KAGGEGGVIA 360
  361 LDAQGQVAMP FNSPGMYRGY MGEDGQPFVA IFQE

Type	Start	End	Confidence
Signal Peptide	1	66	0.76
N-region	1	57
H-region	58	63
C-region	64	66
Cleavage Site	66	67
Non-Cytoplasmic	67	394	0.98