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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115379453, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTVFTLLIQ HSHHKIHLRN KMLQTVSLTI ALVLCFISEG LASDEKSDAR LLEAQASFDE  60
   61 ATKLRDLGKY SEALTQAEHA LSLKEAVLGG THPEVANCLN LVGNLYRLNG NLSHAEPLHQ 120
  121 RALAIREDSL GNSHPDVASS LDSLANLYAD QGVYGQAEPL YQRALAIYEA SLGNSHPLVA 180
  181 TALNNLATLY SDQGLYGRAE PLYQRALAIR EASLGNSHPD VASSLASLAT LYADQGVYGQ 240
  241 AEPLYQRALA IREASLGNSH PLVATALNNL ANLYADQGVY GQAEPLFRRA LAIYEASFGS 300
  301 SHPLVATAFN NLANLYRNQG LYGRAEPLYQ RALAIYEASF GSSHPLVATA LNNLANLYAD 360
  361 QGVYGQAEPL YQRALAIREA SFGNSHPNVA SSLNNLATLY ADQGVYGRAE PLYQRALAIR 420
  421 EASLGNSHPD VASSLNNLAN IYRNQGLYGR AEPLYQRALA IHEASLGNSH PNVAASLDNL 480
  481 ATLYSDQGLH GQAEPLYQRA LAIRKASLGN SHPDVASSLN NLANLYSDQG VYGQAEPLFR 540
  541 RALAIYEASL GNSHPLVATA LNNLANIYGN QGLYGRAEPL YQRALAIREA SLGNSHPDVA 600
  601 SSLDSLANLY ADQGVYGQAE PLYQRALAIY EASLGNSHPL VATALNNLAT LYSDQGLYGR 660
  661 AEPLYQRALA IREASLGNSH PDVASSLNNL ATLYADQGVY GQAEPLYQRA LAIREASLGN 720
  721 SHPDVALFLN NLANIYRNQG LYGRAEPLYQ RALAIHEASL GNSHPLVATA LNSLATLYTD 780
  781 QGLHGQAEPL FRRALAIRKA SLGNSHPLVA NSLNNLANIY RNQGLYGRVE PLYRRGLAIY 840
  841 EASLGNSHPD VALFLNNLAN LYRDQGLYGR AEPLHQRALA LREATLGTHH PLVAESLNEL 900
  901 GKLRLAQHRL SDALPLFSRS FSISERRLRH EALDFSEVRL STFLSYLRSG EQQFYALLRA 960
  961 HPQDARVQRL ALSASLLLKG RSISETATIS RTLYRSLSPE DRDVLERLQG LRTQLAALSL1020
 1021 SGPGALPSDA YQQRLQSLAQ EGDSIEADLA KRSASLRALS SLPSPDDIVS NVAASLPKDA1080
 1081 ALVEFIVYVD SPLVPKPGTP LAKTPRQERY LALVLLPDAS TRAVDLGPAV PIDQAASRLR1140
 1141 DALAEREVSF QSTSQQLYQL AFRPLLAQLG TTRRLFLSPD GQLNLIPFSA LHDGEGFLLD1200
 1201 SFDFTYLTSG RELLPSPLDS APSSSVFVLA DPDFTSPSLS APSGAPPSST ASLFPNALAR1260
 1261 FFADPPPDVT RSAWVPLPGT RLEAQGIQRL LPQAQLFLGS DASKERLLNL PTPGILHLAT1320
 1321 HGFFLGNSSS PPTSRGLAVV NSLGSPPPPQ AEPLLNSGLA LASARIAAPG TALSPQATLV1380
 1381 TALELAGLNL WGTQLVVLSA CDTGRGEIHL GQGVYGLRRA FMAAGAETVL VSLWKVNDNS1440
 1441 THLLMEFYYR NLLAGQGRAF ALREAMLSLR ATHPHPHAWA PFIVLGSDAP LRAITPARPW1500
 1501 TPKPELRMTQ SRWDITPREQ PLGMRNPLNG AYHPPDR

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