YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|36939035, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALKSWLSR SVTSFFRYRQ CLCVPVVANF KKRCFSELIR PWHKTVTIGF GVTLCAVPIA  60
   61 QAVYTLTSLY RQYTSLLGKM NSEEEDEVWQ VIIGARAEMT SKHQEYLKLE TTWMTAVGLS 120
  121 EMAAEAAYQT GADQASITAR NHIQLVKLQV EEVHQLSRKA ETKLAEAQIE ELRQKTQEEG 180
  181 EERAESEQEA YLRED

Type	Start	End	Confidence
Cytoplasmic	1	44	0.66
Transmembrane Helix	45	64	0.70
Non-Cytoplasmic	65	195	0.94