YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115361645
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHARAAASVM DICRIRLGDS ERHFVYQFKS ACYFTNGTQR IRLVSRNIYN REEFMRFDSD  60
   61 VGEFRAVTEL GRPDVEYWNK QYLEQKRAAV DTVCRHNYEG PETHTSLRRF EQPNVVISLS 120
  121 RTEALNHHNT LVCSVTDFYP AKIKVRWFRN GQEETVGVSS TQLIRNGDWT FQVLVMLEMT 180
  181 PRRGEVYTCH VEHPSLKSPI TVEWRAQSES ARSKMLSGIG GCVLGVIFLG LGLFIRHRSQ 240
  241 KGPRGPPPAG LLQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	214	0.66
Transmembrane Helix	215	235	0.96
Cytoplasmic	236	253	0.64