YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115313437, gi...
Protein type:	Transmembrane
Type Confidence:	0.53
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRIFQRRRI RTLRWVWSLM AVLALSLAVC SAIFTVWTLR QTRDLSRSFQ TLQERLEQVN  60
   61 MQRKAIFQLI LEKRELLESQ RFRRDVGGKK GNGRKVASHF EITSDSFQKV GNEGVIKGWT 120
  121 EEQLNMSRAV NYNSETGTFR VERSGVYFVY CQVHFNENQS QYVKLEVSIP KGPLLQCIEG 180
  181 YGTTPASGSH RFHFLKPCQV SGLLRLNKGT ELKAVTGASF SLQTSGKHYF GLFKVN

Type	Start	End	Confidence
Cytoplasmic	1	14	0.51
Transmembrane Helix	15	33	0.50
Non-Cytoplasmic	34	236	0.98