YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115497574, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGKNGETT DENELKGATG GEDVVDDAII EQSAVLLRGY VIQQATIDDP NIHVSHETLG  60
   61 GRPQDEEDPQ IKEVVDQLLK IADDLNKNAE LQHLISTVQS NCAQDVFMTV ARSIFDDGIN 120
  121 WGRVVALFHL AYRLIFQALT QNHLEIIKNI ISWFLQFMKK HISAWIRQQG GWEGIFRSMT 180
  181 RWRTVSTIAA VAFIVAVVYW RRTR

Type	Start	End	Confidence
Cytoplasmic	1	179	0.65
Transmembrane Helix	180	200	0.89
Non-Cytoplasmic	201	204	0.41