YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115497136, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCSALGRRL VACLLNISEA RRKDLVETVA RSAITDIKGE KREGVTVLNI FNDSDYNRSV  60
   61 ITVVANIELI REAVLSACEC ACSLIDMSVH EGIHPCMGAV DLVPLYPLGE DVGLQDCGEE 120
  121 AQALALTLAE RVAGTSAFLF GWADSPQHRG LAQRRKEIGW FRKVLNVSNI KPDIGSQPTR 180
  181 RYGITGVGAS PYVMNCNVTI DTQDLALGRS VASAIRESSP GGIPGVQVMA LPHEGAVEIA 240
  241 CNVESVHGSS SSHGEEQWPN FSIGGQTFCH APASLITARV AELVKHHGVA IKGTALVGFT 300
  301 PRECRRLAEG AISNGIGEFW KELRRVHM

Type	Start	End	Confidence
Signal Peptide	1	20	0.77
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	328	0.99