YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	S238A_DANRE, S25...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFSVAHPAV KAFMCGSLSG TCSTLLFQPL DLVKTRLQTL HSGVQPGTGR VGMVTVFVNV  60
   61 LRTEKLLGLW RGVSPSFVRC IPGVGIYFST YFTLKQHYFS SGAPGPLQAV LLGAGARCVA 120
  121 GVFMLPVTVI KTRFESGRYR YSGVFGALRS VCQTEGPKAL FSGLMATLLR DAPFSGIYVM 180
  181 IYSQTKNLLP PEISQSSYAP VANFSCGVLA GVLASVLTQP ADVVKTHIQV SPDVFSRTSD 240
  241 VVRYIYKEHG LVGFFRGAVP RSLRRTMMAA MAWTVYEQLM AQMGLKS

Type	Start	End	Confidence
Cytoplasmic	1	74	0.56
Transmembrane Helix	75	94	0.81
Non-Cytoplasmic	95	108	0.85
Transmembrane Helix	109	130	0.91
Cytoplasmic	131	287	0.74