YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115494960, gi...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVHLCCCRS LGRVRTHVVI GFILLLLLAG VSLTFLLPNN EDINILRELR RSSNTSRTLA  60
   61 DPEESFTIIM QTYNRTDVLL RLLNHYQAVP HLQCIIIVWN NPGETPPRRL WDELGPHPVP 120
  121 VLFREQRVNR MRNRLMMHPD VKTDAVLMLD DDILLSVPDI SFAFSVWKQF PDQIVGFVPR 180
  181 KHVSSASGVY SYGSFELQDP DKGGGDRYSM ILVGASFFHR RFLKQFQEQP AEVHTLLDRT 240
  241 QNCDDIAMNF IVARQLSKRP SGVFVKPVHM SNLEKDASSG FVGMWHRPEH MLQRSYCLNK 300
  301 LAQIYGHMPL RYSNIMITQL GFPSYANHKS RM

Type	Start	End	Confidence
Cytoplasmic	1	15	0.70
Transmembrane Helix	16	37	0.67
Non-Cytoplasmic	38	332	0.99