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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115497452, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSLTGLLLV VCLQYASGAT HSWKAYYTAT TGLTEFPEFV ALNVIDDQLM GYFDSKTNRF  60
   61 KSQFQWMEDN LGKEYDEQET NILQGHTASF KNNVKVAMER FNQTQGVHTN QRMYGCEWDD 120
  121 ETGAINGFFQ DGYDGEDFLS LDLKELRWIS PVQQGLMTTQ KLNNDRANTE YYKNYFTTEC 180
  181 IEWLQKYLQY GKSSLQKTVS PHVSLLQKSS PVVCHATGFY PSGIKISWQK NGQDHDEDVD 240
  241 LGELLPNEDG TFQKASTLKV NSDELKNNKF TCVVEHQGEI ETRAIEDSVS VGLIAGVAVA 300
  301 VLLVIVIAVA GFMMYRKKKG YKPANSSDDG SRSSAQDGPR A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle