YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RM47_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAASLAVFC RRVSAALKAS TSLISSQTLA STGCRFSLSL LTKNTPNVTS FHQCRLLQTT  60
   61 LSRRGLEEFF DDPKNWGEEK VKSGASWTCQ QLRNKSNEDL HKLWYVLLKE RNMLLTLEQE 120
  121 AKRQRLPMPS PERLEKVVDS MDALDKVVQE REDALRLLQT GQEKPRPGAW RRDIFGRIIW 180
  181 HKFKQWPIPW YLNKRYNRKR FFAMPYVERF VRLRIEKQAR IKARKISLTQ KKEKFLQKKF 240
  241 PHLSEAQKSS AA

Type	Start	End	Confidence
Signal Peptide	1	15	0.96
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	252	0.97