YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115529345, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTIARIATR AAVSQGSQAY LRPVSSAVLS QKVIVEAPVA TQARSLQTSA VQRDIDSAAK  60
   61 FIGAGAATVG VAGSGAGIGS VFGSLIIGYA RNPSLKQQLF SYAILGFALS EAMGLFCLMM 120
  121 AFLLLFAF

Type	Start	End	Confidence
Cytoplasmic	1	61	0.73
Transmembrane Helix	62	87	0.83
Non-Cytoplasmic	88	101	0.63
Transmembrane Helix	102	126	0.90
Cytoplasmic	127	128	0.62