YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115284060, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLKLFRTL TLAVTAFASQ ADASVVIAGT RVIFPSTERE VTIQLTNDSK RPALVQAWLD  60
   61 DGDSRALPEN IDVPFTLTPS MFRMEAGNGQ TLRLVHTGEP LPADRESLFW LNVLEVPPKA 120
  121 AATENRNRIQ LAFRSRIKLM YRPAGLAGNA DDAPMQVDWR VVRGDGGYAL EARNPTPYVV 180
  181 NFGNVQLKSG GRKHDAGMGY VLPRSTQRFP IKDLAGAPAA GSTVEFGSIN DWGRATDIER 240
  241 PVGVEP

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	246	0.99