YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116254072, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVQFDRIAL IGIGLIGSSL AYDIRRLGLA REIVVATRSP DTLKRAEELG LGDRYTTSSQ  60
   61 DAVKDADLVI VSVPVGASES VAKEISASLK PGAIVTDVGS TKASVIAQML PHMPDNVHFI 120
  121 PGHPLAGTEK SGPDAGFPGL FEGRWCIFTP VAGTDEVALK RLRSFWEALG SKVDEMDAEH 180
  181 HDKVLAIVSH LPHIIAYNIV GTADDLETVT ESEVIKYSAS GFRDFTRLAA SDPTMWRDVC 240
  241 LHNRDAILEM LARFSEDLAY LQRAIRWGEG DKIFELFTRT RAIRRSIVQA GQDVDAPDFG 300
  301 RHALDKK

Type	Start	End	Confidence
Signal Peptide	1	21	0.85
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	307	0.98