YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116255832, gi...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDYDYIRSG DAIYERSFAI IRAEADLSRF TGDQAEIAVR MIHACGLVEA AEHFRFSADF  60
   61 VSAARDALKG GAPIFCDAEM VSQGVTRARL PALNEVICTL RDPATPELAR ETGNTRSAAA 120
  121 MHLWLDRLGG SVVAIGNAPT ALFHLLELLR DGAPKPAAIL GMPVGFVGAA ESKDALAENS 180
  181 YGVPFAIVRG RLGGSAMTAA AINALARPGL

Type	Start	End	Confidence
Cytoplasmic	1	122	0.52
Transmembrane Helix	123	143	0.43
Non-Cytoplasmic	144	210	0.70