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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116255210, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIKHEHDHH HSHADGDDHC HCGHEQEKAA SAMIRDPVCG MTVDPQAGKP SLEHEGRTHH  60
   61 FCSDGCRTKF VATPQDYLTA KDPVCGMIVD RSTAKYFLKH EGEKFYFCSA TCQAKFEADP 120
  121 AAYRDGKRPP AKPAPKGTLY TCPMHPEVVS DRPGDCPKCG MALEPMGIPP ADEGPNPELV 180
  181 DFVRRLWISA TLATPLLALS MGPMFGLPLR EAIGEPQATY IELLLATPVV LWAALPFFRR 240
  241 AWASVVNRSP NMWTLIGLGV GTAYVYSVVA TLAPGIFPMS FHGHGAAVPV YFEAAAVIVA 300
  301 LVFVGQVLEL KARERTGSAI RALLDLAPKT ARRIDAEGSE SDVPVDDIQT GDRLRVRPGE 360
  361 RVPVDGSVLE GQSTVDESMI SGEPLPLEKS KGDPLTGGTI NKNGTFVMTA EKVGADTVLS 420
  421 RIVDMVAKAQ RSRAPIQGAV DRVSAVFVPA VVAAAVLAFL VWAAIGPEPR MANGLLAAVA 480
  481 VLIIACPCAL GLATPMSIMI ATGRGAQEGV LIKDAEALER FSKVDTLIVD KTGTLTEGKP 540
  541 KLTDIVTFGG VEESRLLSLA ASLERGSEHP LAEAIVSGAE ERGVPFVEVT GFEAKTGKGV 600
  601 QGRAGGTTVA LGNAAMLADL GIDPAVLAEK TEALRGDGKT VMFVVFDGAL AGLVAVADRI 660
  661 KPTTTAAIKA LHDSGLKIIM ATGDNERTAR AVAKSLGIDE VRADVLPEGK KALIDELRAK 720
  721 GAIIAMAGDG VNDAPALAAA DVGIAMGTGA DVAMESAGIT LVKGDLNGIV RARRLAEATM 780
  781 RNIRQNLGFA FGYNALGVPV AAGMLYPIFG LLLSPMIAAA AMSLSSVSVI SNALRLRFAK 840
  841 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle