YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115258525, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYIDCKREK LPENRRDKNK GRRMSVLLAA SRLIDSISQF MGKLSEYMVL FCCLISAGNA  60
   61 IVRYAFNYSS NGWLEIQWYL FAFVVMLGAS HALRNNEHVR VDLIYGSVSD KAKIWIDIVG 120
  121 LIVFLLPACV YLTWLCWPFF ALSYHQGEIS GNAGGLIRWP VKLILVAGFA LLSLQGLSEL 180
  181 VKRIAALTGY ISIDTKYEKP LQ

Type	Start	End	Confidence
Cytoplasmic	1	46	0.95
Transmembrane Helix	47	66	0.92
Non-Cytoplasmic	67	75	0.83
Transmembrane Helix	76	93	0.97
Cytoplasmic	94	113	0.94
Transmembrane Helix	114	135	0.95
Non-Cytoplasmic	136	155	0.88
Transmembrane Helix	156	177	0.86
Cytoplasmic	178	202	0.94