YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115254147, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAAVRFTA VTHRYGHSLA LDAVDFAVPA GCMAGLIGPD GVGKSTLLGL AAGITRIQHG  60
   61 QIEVLGGNMA GRRHRRAVCA RIAFMPQGLG RNLYPTLSVA ENLDFFGRLF GQGGRQRRAR 120
  121 IDELLRMTGL LPFRDRPAEK LSGGMRQKLG ICASLLHDPD LLILDEPTTG IDPLSRRQFW 180
  181 QLIDLIRARR PQMSVIVATA YMEEAERFDW LAALHGGRLI ATGSPTEIMQ QVGRQTLEAA 240
  241 FIALMPNAAE ADQGSLIVAP RVTGDGPPAI AAEGLTCRFG DFVAVDHVSF RIPKGEIFGF 300
  301 LGSNGSGKST TMKMLTGLLP ASEGVAKLFG QPLKAGDIET RKRVGYMSQA FSLYGELTVR 360
  361 QNLTLHARLF ALPANEIAPR VAKMLAEYDL ADVADQRSQH LPLGIRQRLQ LAAAVLHRPE 420
  421 ILILDEPTSG VDPVARSAFW RSLIRLARRD GVTIFLSTHF MNEAERCDRI SLMHAGKVLA 480
  481 IGSPAELSAE RGKATLAETF IEILSEAGMG EGAEAGVGEA AVAGEHASHS RLFDPGRLWA 540
  541 YTRRETLEIL RDRARLVFAL LGPVMLMLTF GYGISFDVEH LPFAVYDQDQ SAESRQLVES 600
  601 LQGSRYFEER PPIASTDALQ RRLQDGELMV AIEIPPDFGR DLMRRQTPEV SVWLDGAMPF 660
  661 RAETARGYVS GLVSAYLADA SARRTGHTAS PYPVNIESRF RYNQDFKSAN AIVPSVIMLM 720
  721 LVLIPAIMTA LGIVKEKETG TIANFQATPV TRIEFLLGKQ LPYVAIAFAS FLMLLLMMRF 780
  781 VFFVPIKGSI GLLVAGSILY ILSTTAFGLV VSSFMRSQMA AIFATAIVSI IPAVNFSGLL 840
  841 VPVSSLSGGG RFMGLLFPAA WYQPLSVGVI TKGLGFSELW PNLIALAAFG IVFVGTALVA 900
  901 LRKQGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle