YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115255135, gi...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPDASAGQ SHKKSGSLMT IIGIAVLTLL GAGGGWAVGT IVAPNIKGAK EVEQAKDAEA  60
   61 KKKAEEGLAR ISTEANNVVQ LEPITSNLAY PSENWVRLEV ALLFNGPPDV KVSEDIHQDI 120
  121 LAYIRTVSLQ QIEGPRGFQY LKDDIQERVD LRSQGRVSKV MFRTFVIE

Type	Start	End	Confidence
Cytoplasmic	1	17	0.62
Transmembrane Helix	18	39	0.84
Non-Cytoplasmic	40	168	0.73