YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190247
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVGKSSKML QHIDYRMRCI LQDGRIFIGT FKAFDKHMNL ILCDCDEFRK IKPKNSKQAE  60
   61 REEKRVLGLV LLRGENLVSM TVEGPPPKDT GIARVPLAGA AGGPGIGRAA GRGIPAGVPM 120
  121 PQAPAGLAGP VRGVGGPSQQ VMTPQGRGTV AAAAAAATAS IAGAPTQYPP GLGPPPPMGR 180
  181 GAPPPGMMGP PPGMRPPMGP MGIPPGRGTP MGMPSGMRPP PPGCEAFFDP WPQSMEVAPQ 240
  241 RRGLDSSGPR YHRPVCFLCC CSWSLMGLSG FLTGPPPPGM RPPRP

Type	Start	End	Confidence
Cytoplasmic	1	250	0.72
Transmembrane Helix	251	273	0.80
Non-Cytoplasmic	274	285	0.78