YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116250024, gi...
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWKMEPELE QAIGIRIRTL RQEKALTLDD LAAASGVSRA MISRIERAEA SPTASLLARI  60
   61 CAALGLSLSA FFAEEGQASP LARRQEQQVW RDPETGYIRR SVSPPGTPSD VDIVEVEFPP 120
  121 GARVSFPPHA SAHGMTQHIW LFDGELEMTA GEAVYRLRPG DCLFMPVGEG HVFHNPGNAP 180
  181 ARYCVVLNRG GR

Type	Start	End	Confidence
Cytoplasmic	1	54	0.52
Transmembrane Helix	55	73	0.54
Non-Cytoplasmic	74	192	0.97