YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115255924, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKVEAKPN ALWENIKVII QALILAMVIR TVLFQPFTIP SGSMMPTLLV GDYIFVNKFA  60
   61 YGYSKYSLPF SPDVFSGRLF GADPKRGDIV VFRFPPNPEI DYIKRCIGLP GDHIQVTDGV 120
  121 LYVNGKPVPK VADGAFTSDY KLDPGEDVPV FRETLDDGKS YDTLDQSPVS RGDNTREFIV 180
  181 PEGHYFMMGD NRDNSLDSRF DVGFVPAENL VGRASVIFFS LGNDTSFREI WKWPTNMRWD 240
  241 RLFKVVE

Type	Start	End	Confidence
Cytoplasmic	1	15	0.75
Transmembrane Helix	16	34	0.78
Non-Cytoplasmic	35	247	0.82