YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115249762, gi...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMLYDEDEK EENNERWLLT YSDLITLLMI FFVIMYSMSN VDAEKYKQLS QSLNSAFGGS  60
   61 SGVIEGGNSK IEPVVEPGSN DLDTLQNAKF KKVGEEIQKY LNENGMANSV SLRVQDRGLV 120
  121 ISLKDTILFD TGKAIVKDNS RDKIIQIGKM LNEMNSYMRV EGHTDNMSIK NSEFKSNWDL 180
  181 SVMRATNVVQ LLIDNAGIAP DKLSAVGYGE FRPIAENSSE EGRSKNRRVD IVLVDSKYDN 240
  241 VENVSKDK

Type	Start	End	Confidence
Cytoplasmic	1	16	0.71
Transmembrane Helix	17	38	0.78
Non-Cytoplasmic	39	248	0.83