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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126699073, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKQRLSKLL SSTLVLSMLF TAAPNITFAD NTKDNSEKYQ SSDIELHDYS KNAESYTKTK  60
   61 ALAKEKIQTL LSKYGAVSAQ YALIDNGKIE ISGNGGVYSK QDNKNLNKDN MYSIASISKM 120
  121 FTTTAVMKLV DDGKLNLDTP VVKYIPEFKM ADDRYKEITP RMLLNHSSGL MGSSFKNTIL 180
  181 LADNDSYGHD NFLKELQKQR LKAKPGAFSV YCNDGFTLAE ILVERVSGMS FTNFLDKYIN 240
  241 NPLNLQNTKT PENSFDSSKL AKAYVPYWED AVPQDNLNAI GAGGLYSSAE NLCTFAQTFM 300
  301 KNSNGILSPA SVKAMENKEY LNGLWPEGED SILGYGLGWD CVNTYPFNQY NLKALTKGGD 360
  361 SLLFHSNLIV LPDENMAVAV LSSGGSSQLN EIIGQEILLS ALKEKGKIKE IKPDKTFSKP 420
  421 QQVKMPSSLK ENSGLYASSN MIKVDVNDNG TLTVSSPYIE NGPEDKYVYI GQDRFVSEKG 480
  481 NSCLKFVKEK NNITYLNMSS YDDVPGLGQT ASLYYVAQKI DDNNISNSVK EAWKKRNGKD 540
  541 YYLVDEKYTS QSYMFGSVKA TLALSDETPG YIVNTKIMDE NNSNAFIEIP GVIGRDLSDI 600
  601 KLHKENGTEY LSFGTLTYVS EDSITNLPAE KSFTCELESN GYAKWYKIGD DIANKKIEVN 660
  661 LPQNSSFAVY DDKGVPVNYS LVTKNNRVRL PKGGVIVFLG SPNARFEVTY QDEVNASALT 720
  721 GTDRYETSIK ISQAGWENAE NAVLINDSAI ADALAATPFA YKKNAPILLT GSSQINEKTL 780
  781 AELKRLKVKN VYVVGGEASI NEKSLDTIKS NNISVSRISG SDRYQTSMNI AKELNNISNI 840
  841 SKISVVNGEK GLADAVSIGA VSAQNDMPII LTNENSNITE INNLFKNKKI DKSYVIGGEY 900
  901 TVSKNIESKL QNPQRISGST RNETNAKVIK EFYKDSKIDN LYVAKNGMNK QDDLIDGLSV 960
  961 GVLAGKTKSP VMLVGNSLDY NQKELFKTMR FKSVTQIGGN GNENSFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle