YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|166853024, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRALWSAAS GMTAQQLNVD VIANNLANVN TTAFKRDRAE FKDLIYQTLQ RENVYGGQGK  60
   61 PVNMQVGVGV RPSAIVKDFT EGSLQQTENP LDLALDGEGF FAVLGPDGKV YYTRDGSFKL 120
  121 SPNGNNLMLV TADGYPVLDD SGNPIVFDST EKDISVSPMG VISVKNPDGT TQEVATLGIY 180
  181 NFVNTQGLLS VGSNLYEPTE ASGQPGTRDD FEGRMGKVMQ GFLETSNIQI VKEMVDMIAA 240
  241 QRAYEINSKA IQAADEMLGI ANNLRR

Type	Start	End	Confidence
Signal Peptide	1	16	0.78
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	266	0.99