YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114805167, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLALTIAGS DSGGGAGIQA DLKTFSAHGV YGMSVITSIT AQNTMGVLGI EDISPDMVYL  60
   61 QMKAIFEDLY PDAVKIGMVS NESIIKMIAK GLKDYNVKNV VLDPVMISKS GSYLLKPEAV 120
  121 EALKKELIPL SLVVTPNLME AGELIGKEIK NVSDMKEAAK KILDYGAKTV IVKGGHLTGD 180
  181 ALDVFYDGKE FYEITSERID TKNTHGTGCT FSSAIAANIA LGHDLVESIK RAKAYITGAI 240
  241 KHSLAIGHGV GPTNHFWNIE IRKV

Type	Start	End	Confidence
Signal Peptide	1	20	0.50
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	264	0.98