YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114794769, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDKIHHHH HHMEEKRLSA KKGLPPGTLV YTGKYREDFE IEVMNYSIEE FREFKTTDVE  60
   61 SVLPFRDSST PTWINITGIH RTDVVQRVGE FFGIHPLVLE DILNVHQRPK VEFFENYVFI 120
  121 VLKMFTYDKN LHELESEQVS LILTKNCVLM FQEKIGDVFD PVRERIRYNR GIIRKKRADY 180
  181 LLYSLIDALV DDYFVLLEKI DDEIDVLEEE VLERPEKETV QRTHQLKRNL VELRKTIWPL 240
  241 REVLSSLYRD VPPLIEKETV PYFRDVYDHT IQIADTVETF RDIVSGLLDV YLSSVSNKTN 300
  301 EVMKVLTIIA TIFMPLTFIA GIYGMNFEYM PELRWKWGYP VVLAVMGVIA VIMVVYFKKK 360
  361 KWL

Type	Start	End	Confidence
Cytoplasmic	1	304	0.95
Transmembrane Helix	305	325	0.93
Non-Cytoplasmic	326	336	0.84
Transmembrane Helix	337	357	0.95
Cytoplasmic	358	363	0.91