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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114691994
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.60
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPQGLLWL PLLFTSVCVM LNSNVLLWIT ALAIKFTLID SQAQYPVVNT NYGKIQGLRT  60
   61 PLPSEILGPV EQYLGVPYAS PPTGERRFQP PESPSSWTGI RNATQFAAVC PQHLDERFLL 120
  121 HDMLPIWFTA NLDTLMTYVQ DQNEDCLYLN IYVPTEDVKQ SSSSCGRTRV KLCEKGGTNI 180
  181 KRNADDITSN DHGEDEDIHE QNSKKPVMVY IHGGSYMEGT GNMIDGSILA SYGNVIVITI 240
  241 NYRLGILGFL STGDQAAKGN YGLLDQIQAL RWIEENVGAF GGDPKRVTIF GSGAGASCVS 300
  301 LLTLSHYSEG LFQKAIIQSG TALSSWAVNY QPAKYTRILA DKVGCNMLDT TDMVECLKNK 360
  361 NYKELIQQTI TPATYHIAFG PVIDGDVIPD DPQILMEQGE FLNYDIMLGV NQGEGLKFVD 420
  421 GIVDNEDGVT PNDFDFSVSN FVDNLYGYPE GKDILRETIK FMYTDWADKE NPETRRKTLV 480
  481 ALFTDHQWGA PAVATADLHA QYGSPTYFYA FYHHCQSEMK PSWADSAHGD EVPYVFGIPM 540
  541 IGPTELFRCN FSKNDVMLSA VVMTYWTNFA KTGDPNQPVP QDTKFIHTKP NRFQEVAWSK 600
  601 YNPKDQLYLH IGLKPRVRDH YRATKVAFWL ELVPHLHNLN EIFQYVSTTT KVPPPDMTSF 660
  661 PYGTRRSPAK IWPTTKRPAI TPANNPKHSK DPHKTGPEDT TVLIETKRDY STDLSVTIAV 720
  721 GASLLFLNIL AFAALYYKKD KRRHETHRRP SPQRNTTNDI PHIQNEEIMS LQMKQLEHDH 780
  781 ECESLQAHDA LRLTCPPDYT LTLRRSPDDI PLMTPNTITM IPNTLTGMQP LHTFNTFSGG 840
  841 QNSTNLPHGH STTRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle