YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114690127
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLPEPQRPV SWRCPAAGER LQKSGGGRRE QRGSARTLSG PGASRAPRPH APAAARAFLG  60
   61 LRAPDLSSPA PARRGRGGPR SSMNLRLCVQ ALLLLWLSLT AVCGGSLMPL PDGNGLEDGN 120
  121 VRHLVQPRGS RNGPGPCQGG RRKFRLKGPP SAHPLRLCLL HRLVCFSGGL TSIQLSSRTC 180
  181 CSHQWAQLFS PACFPQWRAP GCSLDDSRSL TRIRPVHLPG PSLDWLWRPS PRKPPFFSRS 240
  241 PPP

Type	Start	End	Confidence
Cytoplasmic	1	82	0.87
Transmembrane Helix	83	108	0.72
Non-Cytoplasmic	109	243	0.76