YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114688618
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVAGWARAR ESAGAMGRVR NRATAQRRRR KRPGDPPAAC AAIAVMGASR AQCPRVQVGV  60
   61 GSHAAAKRWL GKLRRKRRWR RVREAGSRDP LPSAPLPDPP APAESPKELD LGAQRERWET 120
  121 FRKLWGLSCE GAAKVLLDTF EYPGLVHHTG GCHCGAVRFA VWAPADLRVV DCSCRLCRKK 180
  181 QHRHFLVPAS RFTLLQGAES IVTYRSNTHP ALHSFCSRCG VQSFHAAVSD PRVYGVAPHC 240
  241 LDEGTVRSVV IEEVGGGDPG EEAAEEHKAI HKTSSQSAPA CPREQEQ

Type	Start	End	Confidence
Signal Peptide	1	51	0.81
N-region	1	42
H-region	43	48
C-region	49	51
Cleavage Site	51	52
Non-Cytoplasmic	52	287	0.99