YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114687708, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSPSAPAV AVQASNASAS PPSGCPMHEG KMKGCPVNTE PSGPTCEKKT YSVPAHQERA  60
   61 YEYVECPIRG TAAENKENLD PSNLMPPPNQ TPAPDQPFAL STVREESSIP RADSEKKWVY 120
  121 PSEQMFWNAM LKKGWKWKDE KPPQRQDFSL LRVVVLTLER ASGSWGRFVK TQHAGECPCG 180
  181 PSLIRFGGKA KEYSPRARIR SWMGYELPFD RHDWIINRCG TEVRYVIDYY DGGEVNKDYQ 240
  241 FTILDVRPAL DSLSAVWDRM KVAWWRWTS

Type	Start	End	Confidence
Signal Peptide	1	19	0.90
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	269	0.99