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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114679316
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGERARGCSL GVAGGCGQGC GSVRDRSEGR RAASGDMRGA ASASAREPTP LPGRGAPRTK  60
   61 PRAGRGPTVG TPATLALPAR GRPRSRNGLA SKGQRGVATT GPGHRALPSR DTALPQERNK 120
  121 KLEAVGTGIE PKTMSQGLVT FGDVAVDFSQ EEWEWLNPIQ RNLYRKVMLE NYRNLASLGL 180
  181 CVSKPDVISS LEQGKEPWTV KRKMTRAWCP DLKAVWKIKE LPLKKDFCEG KLSQAVITER 240
  241 LTSYNLEYSL LGEHWDYDAL FETQPGLVTI KNLAVDFPQQ LHPAQKNFCK NGIWENNSDL 300
  301 GSAGHCVAKP DLVSLLEQEK EPWMVKRELT GSLFSGQRSV RETQELFPKQ DSYAEGVTDR 360
  361 TSNTKLECSS FRENWDSDYV FGRKLAVGQE TQFRQEPITH NKTLSKERER TYNKSGRWFY 420
  421 LDDSEEKVHN HDSIKNFQKS SVVIKQTGIY AGKKLFKCNE CKKTFTQSSS LTVHQRIHTG 480
  481 EKPYKCNECG KAFSDGSSFA RHQRCHTGKK PYECIECGKA FIQNTSLIRH WRYYHTGEKP 540
  541 FDCIDCGKAF SDHIGLNQHR RIHTGEKPYK CDVCHKSFRY GSSLTVHQRI HTGEKPYECD 600
  601 VCRKAFSHHA SLTQHQRVHS GEKPFKCKEC GKAFRQNIHL ASHLRIHTGE KPFECAECGK 660
  661 SFSISSQLAT HQRIHTGEKP YECKVCSKAF TQKAHLAQHQ KTHTGEKPYE CKECGKAFSQ 720
  721 TTHLIQHQRV HTGEKPYKCM ECGKAFGDNS SCTQHQRLHT GQRPYECIEC GKAFKTKSSL 780
  781 ICHRRSHTGE KPYECSVCGK AFSHRQSLSV HQRIHSGKKP YECKECRKTF IQIGHLNQHK 840
  841 RVHTGERSYN YKKSRKVFRQ TAHLAHHQRI HTGESSTCPS LPSTSNPVDL FPKFVWNPSS 900
  901 LPSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle