YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114678150
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAVIARLS PPTPAPFSLS GPGRAGGAIM GVDIRHNKDR KVRRKEPKSQ DIYLRLLVKL  60
   61 YRFLARRTNS TFNQVVLKRL FMSRTNRPPL SLSRMIRKMK LPGRENKTAV VVGTITDDVR 120
  121 VQEVPKLKVC ALRVTSRARS RILRAGGKIL TFDQLALDSP KGCGTVLLSG PRKGREVYRH 180
  181 FGKAPGTPHS HTKPYVRSKG RKFERARGRR ASRGYKN

Type	Start	End	Confidence
Signal Peptide	1	25	0.55
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	217	0.97