YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114678174
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALELRLDG RLLDGSTAGT YREMLIGQSR DGTKPPEGAR QDARSAGLSR DPGALRPPAR  60
   61 TRQEAAAGAA VMDGSGEQPR GGGPTSSEQI MKTGALLLQG FIQDRAGRMR GEAPELALDP 120
  121 VPQDASTKKL SECLKRIGDE LDSNMELQRM IAAVDTDSPR EVFFRVAADM FSDGNFNWGR 180
  181 VVALFYFASK LVLKALCTKV PELIRTIMGW TLDFLRERLL GWIQDQGGWD GLLSYFGTPT 240
  241 WQTVTIFVAG VLTASLTIWK KMG

Type	Start	End	Confidence
Non-Cytoplasmic	1	238	0.64
Transmembrane Helix	239	259	0.78
Cytoplasmic	260	263	0.68