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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114677942
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVTVCSMKL TAAMASGSGD SVTRRSVASQ FFTQEEGPGI DGMTTSERVV DLLNQAALIT  60
   61 NDSKITVLKQ VQELIINKDP TLLDNFLDEI IAFQADKSIE VRKFVIGFIE EACKRDIELL 120
  121 LKLIANLNML LRDENVNVVK KAILTMTQLY KVALQWMVKS RVISELQEAC WDMVSAMAGD 180
  181 IILLLDSDND GIRTHAIKFV EGLIVTLSPR MADSEIPRRQ EHDISLDRIP RDHPYIQYNV 240
  241 LWEEGKAALE QLLKFMVHPA ISSINLTTAL GSLANIARQR PMFMSEVIQA YETLHANLPP 300
  301 TLAKSQVSSV RKNLKLHLLS VLKHPASLEF QAQITTLLVD LGTPQAEIAR NMPSSKDTRK 360
  361 RPRDDSDSTL KKMKLEPNLG EDDEDKDLEP GPSGTSKASA QISGQSDTDI TAEFLQPLLT 420
  421 PDNVANLVLI SMVYLPEAMP ASFQAIYTPV ESAGTEAQIK HLARLMATQM TAAGLGPGVE 480
  481 QTKQCKEEPK EEKVVKTESV LIKRRLSAQG QAISVVGSLS SMSPLEEEAP QAKRRPEPII 540
  541 PVTQPRLAGA GGRKKIFRLS DVLKPLTDAQ VEAMKLGAVK RILRAEKAVA CSGAAQVRIK 600
  601 ILASLVTQFN SGLKAEVLSF ILEDVRARLD LAFAWLYQEY NAYLAAGASG SLDKYEDCLI 660
  661 RLLSGLQEKP DQKDGIFTKV VLEAPLITES ALEVVRKYCE DESRTYLGMS TLRDLIFKRP 720
  721 SRQFQYLHVL LDLSSHEKDK VRSQALLFIK RMYEKEQLRE YVEKFALNYL QLLVHPNPPS 780
  781 VLFGADKDTE VAAPWTEETV KQCLYLYLAL LPQNHKLIHE LAAVYTEAIA DIKRTVLRVI 840
  841 EQPIRGMGMN SPELLLLVEN CPKGAETLVT RCLHSLTDKV PPSPELVKRV RDLYHKRLPD 900
  901 VRFLIPVLNG LEKKEVIQAL PKLIKLNPIV VKEVFNRLLG TQHGEGNSAL SPLNPGELLI 960
  961 ALHNIDSVKC DMKSIIKATN LCFAERNVYT SEVLAVVMQQ LMEQSPLPML LMRTVIQSLT1020
 1021 MYPRLGGFVM NILSRLIMKQ VWKYPKVWEG FIKCCQRTKP QSFQVILQLP PQQLGAVFDK1080
 1081 CPELREPLLA HVRSFTPHQQ AHIPNSIMTI LEASGKQEPE AKEAPAGPLE EDDLEPLTLA1140
 1141 PAPAPRPPQD LIGLRLAQEK ALKRQLEEEQ KLKPGGVGAP SSSSPSPSPS ARPGPPPSEE1200
 1201 AMDFREEGPE CETPGIFISM DDDSGLTEAA LLDSSLEGPL PKETAAGGLT LKEERSPQTL1260
 1261 APIGEDAVKT PSPAAEDARE PEAKGNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle