YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114677596
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGARQIQTSS SQTSPEEAMG TPRIQHLLIL LVLGTSLLTL GLELYCQKGL SMTVEADPAN  60
   61 MFNWTTEEVE TCDKGALCQE TILIIKAGTE TAILATKGCI PEGEEAITIV QHSSPPGLIV 120
  121 TSYSNYCEDY FYNDKDSLSQ FWEFSETTAS TVSTTLHCPT CVALGTCFSA PSLPCPNGTT 180
  181 RCYQGKLEIT GGGIESSVEV KGCTATIGCR LMSGILVVGP MFVREACPHQ LLTQPRKTEN 240
  241 GATCLPIPVW GLQLLLPLLL PSFIHFS

Type	Start	End	Confidence
Cytoplasmic	1	23	0.38
Transmembrane Helix	24	45	0.58
Non-Cytoplasmic	46	267	0.50