YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114676672
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLGLRASD LFSTCPGLLR AWQLRIKAGL RLAARFLPEP LLSLVNHTGQ RSDMQKVTLG  60
   61 LLVFLAGLPV LDANDLEDKN SPFYYDWHSL QVGGLICAGV LCAMGIIIVM SAKCKCKFGQ 120
  121 KSGHHPGETP PLITPGSAQS

Type	Start	End	Confidence
Cytoplasmic	1	56	0.88
Transmembrane Helix	57	73	0.86
Non-Cytoplasmic	74	89	0.88
Transmembrane Helix	90	112	0.90
Cytoplasmic	113	140	0.98