YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114675282
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQSGRSRHQ KRARAQAQLR NLEAYAANPH SFVFTRGCTG RNIRQLSLDV RRVMEPLTAS  60
   61 RLQVRKKNSL KDCVAVAGPL GVTHFLILSK TETNVYFKLM RLPGGPTLTF QVKKYSLVRD 120
  121 VVSSLRRHRM HEQQFAHPPL LVLNSFGPHG MHVKLMATMF QNLFPSINVH KVNLNTIKRC 180
  181 LLIDYNPDSQ ELDFRHYSIK VVPVGASRGM KKLLQEKFPN MSRLQDISEL LATGAGLSES 240
  241 EAEPDGDHNI TELPQAVAGR GNMRAQQSAV RLTEIGPRMT LQLIKVQEGV GEGKVMFHSF 300
  301 VRKTEEELQA ILEAKEKKLR LKAQRQAQQA QNVQRKQEQR EAHRKKSLEG MKKARVGGSD 360
  361 EEASGIPSRT ASLELGEDDD EQEDDDIEYF CQAVGEAPSE DLFPEAKRKR LAKSPGRKRK 420
  421 RWEMDRDAKS CPANFLAAAD DILSGFQGDF LWPILVVEFL VAVASNGLAL YRFSIRKQRP 480
  481 WHPAVVFSVQ LAVSDLLCAL TLPPLAAYLY PPKHWRYGEA ACRLERFLFT CNLLGSVIFI 540
  541 TCISLNRYLG IVHPFFARSH LRPKHAWAVS TAGWVLAALL AMPTLSFSHL KRPQQGAGNC 600
  601 SVARPEACIK CLGTAEHRLA AYRAYSLVLG GLGCXLPLLL TLAAYVCVHP LLYMAAVPSL 660
  661 GCCCRHCPGY RDSWNPEDAK STGQALPLNA TAAPKQSEPQ SHELSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle