YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114675154
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIYGLGGRP GRRALTYDVI GTLSIVALPG LFRPALLSSP LIGWRVRHFK KVRIPSAFLQ  60
   61 DTEGEEGGYQ AAPTLRALLP SLIGSAGCPS LLHSPLIGHS TAALRGAGSA PVGCLWWGCG 120
  121 VADPAGSART MGTRDDEYDY LFKVVLIGDS GVGKSNLLSR FTRNEFNLES KSTIGVEFAT 180
  181 RSIQVDGKTI KAQIWDTAGQ ERYRAITSAY YRGAVGALLV YDIAKHLTYE NVERWLKELR 240
  241 DHADSNIVIM LVGNKSDLRH LRAVPTDEAR AFAEKNNLSF IETSALDSTN VEEAFKNILT 300
  301 EIYRIVSQKQ IADRAAHDES PGNNVVDISV PPTTDGQKPN KLQCCQNL

Type	Start	End	Confidence
Cytoplasmic	1	13	0.80
Transmembrane Helix	14	36	0.80
Non-Cytoplasmic	37	348	0.68