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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114674611
Protein type: Globular with Signal Peptide
Type Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRDVAASYS PVCACVGAVA QGGCGSRGSQ WRRFSSTPFS TGDASPAGLR CKQITEFRSG  60
   61 SASAGGTTIP DRQRGRRGGS RRGGSRRCPQ DLRASAGCPA RRPQDPGGYP CRGESAGAAA 120
  121 AAVPSQLPPR AAPPPARMLE EAGEVLENML KASCLPLGFI VFLPAVLLLV APPLPAADAA 180
  181 HEFTVYRMQQ YDLQGQPYGT RNAVLNTEAR TMAAEVLSRR CVLMRLLDFS YEQYQKALRQ 240
  241 SAGAVVIILP RAMAAVPQDV VRQFMEIEPE MLAMETIVPV YFAVEDEALL SIYEQTQAAS 300
  301 ASQGSASAAE VLLRTATANG FQMVTSGVQS KAVSDWLIAS VEGRLTGLGG EDLPTIVIVA 360
  361 HYDAFGVAPW LSLGADSNGS GVSVLLELAR LFSRLYTYKR THAAYNLLFF ASGGGKFNYQ 420
  421 GTKRWLEDNL DHTDSSLLQD NVAFVLCLDT VGRGSSLHLH VSKPPREGTL QHAFLRELET 480
  481 VAAHQFPEVR FSMVHKRINL AEDVLAWEHE RFAIRRLPAF TLSHLESHRD GQRSSIMDVR 540
  541 SRVDSKTLTR NTRIIAEALT RVIYNLTEKG TPPDMPVFTE QMQIQQEQLD SVMDWLTNQP 600
  601 RAAQLVDKDS TFLSTLEHHL SRYLKDVKQH HVKADKRDPE FVFYDQLKQV MNAYRVKPAV 660
  661 FDLLLAVGIA AYLGMAYVAV QVSSAQAQHF SLLYKTVQRL LVKAKTQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle