YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114674372
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGQRQGQHC PATEDCGPTD DTLSYQLLHL EDDQEEEGRP LTLWSGCEAF LTLPGPSCLS  60
   61 LWLRLFPAGL AAAPGGALSC TCFMSIVGNP RLLTQLIARR TSQQEQEPSR PCVSVRTTSC 120
  121 FGIRCSGANK ERSGVTPDHG APAVSVATVE TALACPGRDA AFPSPRDHPD VSAQFESDFL 180
  181 AMCPQATWSP EGFLPDSKMA MRLPLPSRPR RAGPAHLQDG GSLGQARFPP PDSPRTHSQD 240
  241 GVSRKATRQL TGSDAVTRLR FLWVPPPGGF LASGRCWRGP AGLSPPPGCS GSQWAARAGD 300
  301 VARARPPSGA RAFPAARTLP SAQPRKRRRA WGGRREGKLA PGPRRGPESL RSPPYPCPQC 360
  361 APVRGQGVSV ISGEKRPPRG IVPDIAVGTK RGSDELFSTC VTNGPFIMSS NSASAANGND 420
  421 SKKFKGDSRS AGVPSRVIHI RKLPIDVTEG EVISLGLPFG KVTNLLMLKG KNQAFIEMNT 480
  481 EEAANTMVNY YTSVTPVLRG QPIYIQFSNH KELKTDSSPN QARAQAALQA VNSVQSGNLA 540
  541 LAASAAAVDA GMAMAGQSPV LRIIVENLFY PVTLDVLHQI FSKFGTVLKI ITFTKNNQFQ 600
  601 ALLQYADPVS AQHAKLSLDG QNIYNACCTL RIDFSKLTSL NVKYNNDKSR DYTRPDLPSG 660
  661 DSQPSLDQTM AAAFGAPGII SASPYAGAGF PPTFAIPQAA GLSVPNVHGA LAPLAIPSAA 720
  721 AAAAAAGRIA IPGLAGAGNS VLLVSNLNPE RVTPQSLFIL FGVYGDVQRV KILFNKKENA 780
  781 LVQMADGNQA QLAMSHLNGH KLHGKPIRIT LSKHQNVQLP REGQEDQGLT KDYGNSPLHR 840
  841 FKKPGSKNFQ NIFPPSATLH LSNIPPSVSE EDLKVLFSSN GGVVKGFKFF QKDRKMALIQ 900
  901 MGSVEEAVQA LIDLHNHDLG ENHHLRVSFS KSTI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle