YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114673179
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRGEYDGR THRTHTPVGC EDERKRRRKD NDEVSGFLKL LPYQPQIQYE IVLISPSVQK  60
   61 KANTGHTRAL IAHHRSRQAA GLSVFSEGRF LARWGRGFPE SSFWAPSASV GRRRPWWRHV 120
  121 TGGGGREIAW TSGRPRTAMA FTLYSLLQAA LLCVNAIAVL HEERFLKNIG WGTDQGIGGF 180
  181 GEEPGIKSQL MNLIRSVRTV MRVPLIIVNS IAIVLLLLFG

Type	Start	End	Confidence
Cytoplasmic	1	139	0.69
Transmembrane Helix	140	161	0.73
Non-Cytoplasmic	162	198	0.37
Transmembrane Helix	199	219	0.92
Cytoplasmic	220	220	0.35