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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114670061
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVWLLILL LTARSQRGKS HASQTLDPSS AAAGGKASNW LGSTELAWPS PALSDLSFSL  60
   61 GTGSALGLVL CSRGATELPR PPPLCSLPAP SQRSAWDPRR QLTPSLTAAD EWRRRPQVPG 120
  121 PSDKRAGGGG SGRAQSSAPA PPSTARFSRP APSATGPRRD ERRERPRRPR GGGGGAGGGG 180
  181 AGGRGCRFVV RPGPRKEKWE EGGARRPAPS AAHGDDSRHI RDPPAVAAAA PAARAPAPAA 240
  241 VVTPPRLAVA PVPPAAPAAG DMSNPGGRRN GPVKLRLTVL CAKNLVKKDF FRLPDPFAKV 300
  301 VVDGSGQCHS TDTVKNTLDP KWNQHYDLYI GKSDSVTISV WNHKKIHKKQ GAGFLGCVRL 360
  361 LSNAINRLKD TGYQRLDLCK LGPNDNDTVR GQIVVSLQSR DRIGTGGQVV DCSRLFDNDL 420
  421 PDGWEERRTA SGRIQYLNHI TRTTQWERPT RPASEYSSPG RPLSCFVDEN TPISGTNGAT 480
  481 CGQSSDPRLA ERRVRSQRHR NYMSRTHLHT PPDLPEGYEQ RTTQQGQVYF LHTQTGVSTW 540
  541 HDPRVPRDLS NINCEELGPL PPGWEIRNTA TGRVYFVDHN NRTTQFTDPR LSANLHLVLN 600
  601 RQNQLKDQQQ QQVVSLCPDD TECLTVPRYK RDLVQKLKIL RQELSQQQPQ AGHCRIEVSR 660
  661 EEIFEESYRQ VMKMRPKDLW KRLMIKFRGE EGLDYGGVAR EWLYLLSHEM LNPYYGLFQY 720
  721 SRDDIYTLQI NPDSAVNPEH LSYFHFVGRI MGMAVFHGHY IDGGFTLPFY KQLLGKSITL 780
  781 DDMELVDPDL HNSLVWILEN DITGVLDHTF CVEHNAYGEI IQHELKPNGK SIPVNEENKK 840
  841 EYVRLYVNWR FLRGIEAQFL ALQKGFNEVI PQHLLKTFDE KELELIICGL GKIDVNDWKV 900
  901 NTRLKHCTPD SNIVKWFWKA VEFFDEERRA RLLQFVTGSS RVPLQGFKAL QGAAGPRLFT 960
  961 IHQIDACTNN LPKAHTCFNR IDIPPYESYE KLYEKLLTAI EETCGFAVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle